Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASF1A | CENPA | ENSAMEP00000003807 | ENSAMEP00000002226 | Anti-silencing function 1A histone chaperone. | Centromere protein A. | 0.500 |
ASF1A | H3-3A | ENSAMEP00000003807 | ENSAMEP00000015368 | Anti-silencing function 1A histone chaperone. | Histone H3.3. | 0.698 |
ASF1A | HAT1 | ENSAMEP00000003807 | ENSAMEP00000008940 | Anti-silencing function 1A histone chaperone. | Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. | 0.717 |
ASF1A | LOC100465110 | ENSAMEP00000003807 | ENSAMEP00000019540 | Anti-silencing function 1A histone chaperone. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.986 |
ASF1A | LOC100470602 | ENSAMEP00000003807 | ENSAMEP00000010254 | Anti-silencing function 1A histone chaperone. | Histone H3; Belongs to the histone H3 family. | 0.698 |
ASF1A | NASP | ENSAMEP00000003807 | ENSAMEP00000014426 | Anti-silencing function 1A histone chaperone. | Nuclear autoantigenic sperm protein. | 0.994 |
CENPA | ASF1A | ENSAMEP00000002226 | ENSAMEP00000003807 | Centromere protein A. | Anti-silencing function 1A histone chaperone. | 0.500 |
CENPA | G1LTV1_AILME | ENSAMEP00000002226 | ENSAMEP00000010499 | Centromere protein A. | Histone H2A; Belongs to the histone H2A family. | 0.564 |
CENPA | G1LU76_AILME | ENSAMEP00000002226 | ENSAMEP00000010624 | Centromere protein A. | Histone H2A; Belongs to the histone H2A family. | 0.564 |
CENPA | H3-3A | ENSAMEP00000002226 | ENSAMEP00000015368 | Centromere protein A. | Histone H3.3. | 0.529 |
CENPA | HAT1 | ENSAMEP00000002226 | ENSAMEP00000008940 | Centromere protein A. | Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. | 0.496 |
CENPA | LOC100465110 | ENSAMEP00000002226 | ENSAMEP00000019540 | Centromere protein A. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.979 |
CENPA | LOC100465694-2 | ENSAMEP00000002226 | ENSAMEP00000021003 | Centromere protein A. | Histone H2A; Belongs to the histone H2A family. | 0.419 |
CENPA | LOC100470602 | ENSAMEP00000002226 | ENSAMEP00000010254 | Centromere protein A. | Histone H3; Belongs to the histone H3 family. | 0.553 |
CENPA | NASP | ENSAMEP00000002226 | ENSAMEP00000014426 | Centromere protein A. | Nuclear autoantigenic sperm protein. | 0.530 |
DNMT3A | H3-3A | ENSAMEP00000002620 | ENSAMEP00000015368 | DNA methyltransferase 3 alpha; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Histone H3.3. | 0.483 |
DNMT3A | HAT1 | ENSAMEP00000002620 | ENSAMEP00000008940 | DNA methyltransferase 3 alpha; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. | 0.453 |
DNMT3A | LOC100465110 | ENSAMEP00000002620 | ENSAMEP00000019540 | DNA methyltransferase 3 alpha; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.927 |
DNMT3A | LOC100470602 | ENSAMEP00000002620 | ENSAMEP00000010254 | DNA methyltransferase 3 alpha; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Histone H3; Belongs to the histone H3 family. | 0.483 |
G1LTV1_AILME | CENPA | ENSAMEP00000010499 | ENSAMEP00000002226 | Histone H2A; Belongs to the histone H2A family. | Centromere protein A. | 0.564 |
page 1 of 4