STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dole_1612PFAM: glycosyl transferase family 2; KEGG: syf:Synpcc7942_1173 hypothetical protein. (441 aa)    
Predicted Functional Partners:
Dole_1611
KEGG: maq:Maqu_3858 hypothetical protein.
 
    0.875
Dole_2552
PFAM: SNARE associated Golgi protein; KEGG: abo:ABO_2183 mercuric reductase, putative.
 
   
 0.708
Dole_1598
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; KEGG: gur:Gura_3749 pyridine nucleotide-disulphide oxidoreductase dimerisation region.
 
   
 0.686
Dole_2542
PFAM: protein of unknown function DUF1499; KEGG: dps:DP1404 hypothetical protein.
 
     0.558
Dole_2031
KEGG: pca:Pcar_1794 mannose-1-phosphate guanylyltransferase-like; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
  
 
 0.516
Dole_1810
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: dps:DPPB91 related to UDP-galactose-lipid carrier transferase.
 
  
 0.459
Dole_2618
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
 
   
 0.444
Dole_1613
Hypothetical protein.
       0.424
Dole_1610
TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; KEGG: noc:Noc_2047 acetoacetyl-CoA synthase.
     
 0.420
Your Current Organism:
Desulfococcus oleovorans
NCBI taxonomy Id: 96561
Other names: D. oleovorans Hxd3, Desulfobacteirum oleovorans Hxd3, Desulfococcus oleovorans Hxd3, delta proteobacterium Hxd3, sulfate-reducing bacterium Hxd3
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