Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Dole_0910 | Dole_2012 | Dole_0910 | Dole_2012 | KEGG: aba:Acid345_0648 hypothetical protein. | PFAM: Peptidoglycan-binding LysM; KEGG: aau:AAur_3228 putative LysM domain protein. | 0.414 |
| Dole_1995 | Dole_2012 | Dole_1995 | Dole_2012 | PFAM: OmpA/MotB domain protein; KEGG: gsu:GSU0360 OmpA domain protein. | PFAM: Peptidoglycan-binding LysM; KEGG: aau:AAur_3228 putative LysM domain protein. | 0.414 |
| Dole_1995 | rlpA | Dole_1995 | Dole_2675 | PFAM: OmpA/MotB domain protein; KEGG: gsu:GSU0360 OmpA domain protein. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.492 |
| Dole_2012 | Dole_0910 | Dole_2012 | Dole_0910 | PFAM: Peptidoglycan-binding LysM; KEGG: aau:AAur_3228 putative LysM domain protein. | KEGG: aba:Acid345_0648 hypothetical protein. | 0.414 |
| Dole_2012 | Dole_1995 | Dole_2012 | Dole_1995 | PFAM: Peptidoglycan-binding LysM; KEGG: aau:AAur_3228 putative LysM domain protein. | PFAM: OmpA/MotB domain protein; KEGG: gsu:GSU0360 OmpA domain protein. | 0.414 |
| Dole_2012 | Dole_2013 | Dole_2012 | Dole_2013 | PFAM: Peptidoglycan-binding LysM; KEGG: aau:AAur_3228 putative LysM domain protein. | PFAM: peptidase M29 aminopeptidase II; KEGG: sat:SYN_02963 aminopeptidase. | 0.588 |
| Dole_2012 | pal | Dole_2012 | Dole_2209 | PFAM: Peptidoglycan-binding LysM; KEGG: aau:AAur_3228 putative LysM domain protein. | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.414 |
| Dole_2012 | rlpA | Dole_2012 | Dole_2675 | PFAM: Peptidoglycan-binding LysM; KEGG: aau:AAur_3228 putative LysM domain protein. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.457 |
| Dole_2013 | Dole_2012 | Dole_2013 | Dole_2012 | PFAM: peptidase M29 aminopeptidase II; KEGG: sat:SYN_02963 aminopeptidase. | PFAM: Peptidoglycan-binding LysM; KEGG: aau:AAur_3228 putative LysM domain protein. | 0.588 |
| pal | Dole_2012 | Dole_2209 | Dole_2012 | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | PFAM: Peptidoglycan-binding LysM; KEGG: aau:AAur_3228 putative LysM domain protein. | 0.414 |
| rlpA | Dole_1995 | Dole_2675 | Dole_1995 | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | PFAM: OmpA/MotB domain protein; KEGG: gsu:GSU0360 OmpA domain protein. | 0.492 |
| rlpA | Dole_2012 | Dole_2675 | Dole_2012 | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | PFAM: Peptidoglycan-binding LysM; KEGG: aau:AAur_3228 putative LysM domain protein. | 0.457 |