STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dole_2425Hypothetical protein; KEGG: mac:MA2525 WD40-repeat containing protein. (556 aa)    
Predicted Functional Partners:
Dole_1999
KEGG: gsu:GSU2533 hypothetical protein.
  
 
 
 0.793
Dole_1997
KEGG: gsu:GSU2533 hypothetical protein.
  
 
 
 0.789
Dole_2424
PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: pap:PSPA7_3543 hypothetical protein.
 
     0.694
Dole_0910
KEGG: aba:Acid345_0648 hypothetical protein.
 
 
 0.640
Dole_0303
KEGG: dde:Dde_3708 hypothetical protein.
 
    0.634
Dole_1995
PFAM: OmpA/MotB domain protein; KEGG: gsu:GSU0360 OmpA domain protein.
  
 
 0.579
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.579
Dole_1944
PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: maq:Maqu_0645 membrane protein involved in aromatic hydrocarbon degradation.
  
     0.552
Dole_1772
PFAM: regulatory protein TetR; KEGG: xau:Xaut_4073 transcriptional regulator, TetR family.
  
     0.534
Dole_2423
PFAM: Sporulation domain protein; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: aci:ACIAD0668 conserved hypothetical protein; putative signal peptide.
 
 
 
 0.533
Your Current Organism:
Desulfococcus oleovorans
NCBI taxonomy Id: 96561
Other names: D. oleovorans Hxd3, Desulfobacteirum oleovorans Hxd3, Desulfococcus oleovorans Hxd3, delta proteobacterium Hxd3, sulfate-reducing bacterium Hxd3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.