STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA6GATA binding protein 6. (482 aa)    
Predicted Functional Partners:
LMCD1
LIM and cysteine rich domains 1.
    
 0.937
SOX17
SRY-box transcription factor 17.
   
 0.889
FOXA2
Forkhead box A2.
    
 0.873
NANOG
Homeobox domain-containing protein.
      
 0.835
FOXA3
Forkhead box A3.
   
 0.825
FOXA1
Forkhead box A1.
    
 0.816
M3XRQ5_MUSPF
Uncharacterized protein.
    
 0.808
ZFPM2
Zinc finger protein, FOG family member 2.
   
 0.786
NKX2-5
NK2 homeobox 5.
   
 0.775
SRF
Serum response factor.
    
 0.700
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.