Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARNT | ARNT2 | ENSMPUP00000004332 | ENSMPUP00000015337 | Aryl hydrocarbon receptor nuclear translocator. | Aryl hydrocarbon receptor nuclear translocator 2. | 0.928 |
ARNT | SIM2 | ENSMPUP00000004332 | ENSMPUP00000008179 | Aryl hydrocarbon receptor nuclear translocator. | SIM bHLH transcription factor 2. | 0.690 |
ARNT2 | ARNT | ENSMPUP00000015337 | ENSMPUP00000004332 | Aryl hydrocarbon receptor nuclear translocator 2. | Aryl hydrocarbon receptor nuclear translocator. | 0.928 |
ARNT2 | SIM2 | ENSMPUP00000015337 | ENSMPUP00000008179 | Aryl hydrocarbon receptor nuclear translocator 2. | SIM bHLH transcription factor 2. | 0.690 |
BEGAIN | SIM2 | ENSMPUP00000002881 | ENSMPUP00000008179 | Brain enriched guanylate kinase associated. | SIM bHLH transcription factor 2. | 0.457 |
EHF | SIM2 | ENSMPUP00000011582 | ENSMPUP00000008179 | ETS homologous factor. | SIM bHLH transcription factor 2. | 0.455 |
ERN2 | SIM2 | ENSMPUP00000012093 | ENSMPUP00000008179 | Endoplasmic reticulum to nucleus signaling 2. | SIM bHLH transcription factor 2. | 0.526 |
M3XMN1_MUSPF | RANGAP1 | ENSMPUP00000000331 | ENSMPUP00000016307 | Ubiquitin-like domain-containing protein. | Ran GTPase activating protein 1. | 0.988 |
M3XMN1_MUSPF | SIM2 | ENSMPUP00000000331 | ENSMPUP00000008179 | Ubiquitin-like domain-containing protein. | SIM bHLH transcription factor 2. | 0.526 |
PPL | SIM2 | ENSMPUP00000014764 | ENSMPUP00000008179 | Periplakin. | SIM bHLH transcription factor 2. | 0.452 |
RANGAP1 | M3XMN1_MUSPF | ENSMPUP00000016307 | ENSMPUP00000000331 | Ran GTPase activating protein 1. | Ubiquitin-like domain-containing protein. | 0.988 |
RANGAP1 | SIM2 | ENSMPUP00000016307 | ENSMPUP00000008179 | Ran GTPase activating protein 1. | SIM bHLH transcription factor 2. | 0.440 |
SIM2 | ARNT | ENSMPUP00000008179 | ENSMPUP00000004332 | SIM bHLH transcription factor 2. | Aryl hydrocarbon receptor nuclear translocator. | 0.690 |
SIM2 | ARNT2 | ENSMPUP00000008179 | ENSMPUP00000015337 | SIM bHLH transcription factor 2. | Aryl hydrocarbon receptor nuclear translocator 2. | 0.690 |
SIM2 | BEGAIN | ENSMPUP00000008179 | ENSMPUP00000002881 | SIM bHLH transcription factor 2. | Brain enriched guanylate kinase associated. | 0.457 |
SIM2 | EHF | ENSMPUP00000008179 | ENSMPUP00000011582 | SIM bHLH transcription factor 2. | ETS homologous factor. | 0.455 |
SIM2 | ERN2 | ENSMPUP00000008179 | ENSMPUP00000012093 | SIM bHLH transcription factor 2. | Endoplasmic reticulum to nucleus signaling 2. | 0.526 |
SIM2 | M3XMN1_MUSPF | ENSMPUP00000008179 | ENSMPUP00000000331 | SIM bHLH transcription factor 2. | Ubiquitin-like domain-containing protein. | 0.526 |
SIM2 | PPL | ENSMPUP00000008179 | ENSMPUP00000014764 | SIM bHLH transcription factor 2. | Periplakin. | 0.452 |
SIM2 | RANGAP1 | ENSMPUP00000008179 | ENSMPUP00000016307 | SIM bHLH transcription factor 2. | Ran GTPase activating protein 1. | 0.440 |
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