Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHD8 | EPDR1 | ENSMPUP00000000171 | ENSMPUP00000018120 | Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] | Ependymin related 1. | 0.450 |
CHD8 | RNF212B | ENSMPUP00000000171 | ENSMPUP00000006736 | Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] | Ring finger protein 212B. | 0.434 |
CHD8 | SUPT16H | ENSMPUP00000000171 | ENSMPUP00000000170 | Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] | SPT16 homolog, facilitates chromatin remodeling subunit. | 0.739 |
CHD8 | TOX4 | ENSMPUP00000000171 | ENSMPUP00000000178 | Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] | TOX high mobility group box family member 4. | 0.712 |
EPDR1 | CHD8 | ENSMPUP00000018120 | ENSMPUP00000000171 | Ependymin related 1. | Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] | 0.450 |
EPDR1 | STARD3NL | ENSMPUP00000018120 | ENSMPUP00000018119 | Ependymin related 1. | STARD3 N-terminal like protein. | 0.519 |
EPDR1 | TOX4 | ENSMPUP00000018120 | ENSMPUP00000000178 | Ependymin related 1. | TOX high mobility group box family member 4. | 0.652 |
GIGYF2 | RBMX2 | ENSMPUP00000005209 | ENSMPUP00000001987 | GRB10 interacting GYF protein 2. | RNA binding motif protein X-linked 2. | 0.739 |
GIGYF2 | TOX4 | ENSMPUP00000005209 | ENSMPUP00000000178 | GRB10 interacting GYF protein 2. | TOX high mobility group box family member 4. | 0.746 |
GIGYF2 | USP4 | ENSMPUP00000005209 | ENSMPUP00000013743 | GRB10 interacting GYF protein 2. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.651 |
RBMX2 | GIGYF2 | ENSMPUP00000001987 | ENSMPUP00000005209 | RNA binding motif protein X-linked 2. | GRB10 interacting GYF protein 2. | 0.739 |
RBMX2 | TOX4 | ENSMPUP00000001987 | ENSMPUP00000000178 | RNA binding motif protein X-linked 2. | TOX high mobility group box family member 4. | 0.739 |
RBMX2 | USP4 | ENSMPUP00000001987 | ENSMPUP00000013743 | RNA binding motif protein X-linked 2. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.637 |
RNF212 | SUPT16H | ENSMPUP00000011120 | ENSMPUP00000000170 | Ring finger protein 212. | SPT16 homolog, facilitates chromatin remodeling subunit. | 0.457 |
RNF212 | TOX4 | ENSMPUP00000011120 | ENSMPUP00000000178 | Ring finger protein 212. | TOX high mobility group box family member 4. | 0.607 |
RNF212B | CHD8 | ENSMPUP00000006736 | ENSMPUP00000000171 | Ring finger protein 212B. | Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] | 0.434 |
RNF212B | SUPT16H | ENSMPUP00000006736 | ENSMPUP00000000170 | Ring finger protein 212B. | SPT16 homolog, facilitates chromatin remodeling subunit. | 0.530 |
RNF212B | TOX4 | ENSMPUP00000006736 | ENSMPUP00000000178 | Ring finger protein 212B. | TOX high mobility group box family member 4. | 0.633 |
STARD3NL | EPDR1 | ENSMPUP00000018119 | ENSMPUP00000018120 | STARD3 N-terminal like protein. | Ependymin related 1. | 0.519 |
STARD3NL | TOX4 | ENSMPUP00000018119 | ENSMPUP00000000178 | STARD3 N-terminal like protein. | TOX high mobility group box family member 4. | 0.663 |
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