STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CELF3CUGBP Elav-like family member 3. (541 aa)    
Predicted Functional Partners:
MEX3B
Mex-3 RNA binding family member B.
      
 0.638
SRRM4
Serine/arginine repetitive matrix 4.
   
  
 0.630
RBFOX3
RNA binding protein fox-1 homolog 3; RNA-binding protein that regulates alternative splicing events.
  
  
 0.614
XXYLT1
Xyloside xylosyltransferase 1.
      
 0.511
FTSJ3
pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
      
 0.511
NOVA2
NOVA alternative splicing regulator 2.
      
 0.470
NOVA1
NOVA alternative splicing regulator 1.
      
 0.470
DHDDS
Alkyl transferase; Belongs to the UPP synthase family.
      
 0.470
PTBP2
Polypyrimidine tract binding protein 2.
      
 0.461
ZNF304
Zinc finger protein 304.
      
 0.456
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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