Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APOA4Apolipoprotein A4. (385 aa)    
Predicted Functional Partners:
APOB
Apolipoprotein B.
   
 0.998
APOA2
Apolipoprotein A2.
   
 0.998
APOC3
Apolipoprotein C3.
   
 0.996
APOC2
Apolipoprotein C2.
   
 0.980
PLA2G15
Phospholipase A2 group XV.
   
 0.969
M3YT50_MUSPF
Vitellogenin domain-containing protein.
   
 0.957
APOE
Apolipoprotein E.
   
0.933
PLTP
Phospholipid transfer protein.
   
 0.933
APOC1
Apolipoprotein C1.
   
 0.921
APOH
Apolipoprotein H.
   
 0.920
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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