STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NYNRINNYN domain and retroviral integrase containing. (1891 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
    
 0.851
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.842
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.842
WDR73
WD repeat domain 73.
    
 0.842
M3Z5Y3_MUSPF
WD_REPEATS_REGION domain-containing protein.
    
 0.842
SDR39U1
Short chain dehydrogenase/reductase family 39U member 1.
      
 0.749
STOML1
Stomatin like 1.
   
  
 0.748
CBLN3
Cerebellin 3 precursor.
    
 
 0.747
M3Y278_MUSPF
V-SNARE coiled-coil homology domain-containing protein.
      
 0.740
M3Y1V5_MUSPF
Histone deacetylase 8; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
   
 0.738
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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