STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTF2Replication termination factor 2. (306 aa)    
Predicted Functional Partners:
HOXB8
Homeobox B8.
      
 0.641
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
   
  
 0.529
SDE2
SDE2 telomere maintenance homolog.
      
 0.526
RBM17
RNA binding motif protein 17.
      
 0.511
RPS11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
      
 0.471
UBXN7
UBX domain protein 7.
      
 0.461
SPRTN
SprT-like N-terminal domain.
      
 0.459
C20orf85
Chromosome 20 open reading frame 85.
      
 0.437
TRAIP
TRAF interacting protein.
      
 0.432
NPEPL1
Aminopeptidase like 1.
      
 0.431
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.