IFIT2 protein (Mustela putorius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

IFIT2

Interferon induced protein with tetratricopeptide repeats 2. (469 aa)

Predicted Functional Partners:

LEO1

0.749

G9K828_MUSPF

0.749

ISG15

0.578

TEP1

0.559

BBS9

0.538

RSAD2

0.506

BBS7

0.504

CDC73

0.493

M3Z344_MUSPF

0.493

TTC8

0.491

Your Current Organism:

Mustela putorius

NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS7	BBS9	ENSMPUP00000017294	ENSMPUP00000005532	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	Bardet-Biedl syndrome 9.	0.999
BBS7	IFIT2	ENSMPUP00000017294	ENSMPUP00000006434	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	Interferon induced protein with tetratricopeptide repeats 2.	0.504
BBS7	TTC8	ENSMPUP00000017294	ENSMPUP00000008119	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	Tetratricopeptide repeat domain 8.	0.998
BBS9	BBS7	ENSMPUP00000005532	ENSMPUP00000017294	Bardet-Biedl syndrome 9.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.999
BBS9	IFIT2	ENSMPUP00000005532	ENSMPUP00000006434	Bardet-Biedl syndrome 9.	Interferon induced protein with tetratricopeptide repeats 2.	0.538
BBS9	TTC8	ENSMPUP00000005532	ENSMPUP00000008119	Bardet-Biedl syndrome 9.	Tetratricopeptide repeat domain 8.	0.999
CDC73	G9K828_MUSPF	ENSMPUP00000004608	ENSMPUP00000007605	Cell division cycle 73.	Senescence downregulated leo1-like protein.	0.999
CDC73	IFIT2	ENSMPUP00000004608	ENSMPUP00000006434	Cell division cycle 73.	Interferon induced protein with tetratricopeptide repeats 2.	0.493
CDC73	LEO1	ENSMPUP00000004608	ENSMPUP00000007593	Cell division cycle 73.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.999
CDC73	TEP1	ENSMPUP00000004608	ENSMPUP00000018013	Cell division cycle 73.	Telomerase associated protein 1.	0.784
CDC73	TTC8	ENSMPUP00000004608	ENSMPUP00000008119	Cell division cycle 73.	Tetratricopeptide repeat domain 8.	0.493
G9K828_MUSPF	CDC73	ENSMPUP00000007605	ENSMPUP00000004608	Senescence downregulated leo1-like protein.	Cell division cycle 73.	0.999
G9K828_MUSPF	IFIT2	ENSMPUP00000007605	ENSMPUP00000006434	Senescence downregulated leo1-like protein.	Interferon induced protein with tetratricopeptide repeats 2.	0.749
G9K828_MUSPF	ISG15	ENSMPUP00000007605	ENSMPUP00000013820	Senescence downregulated leo1-like protein.	ISG15 ubiquitin like modifier.	0.485
G9K828_MUSPF	TEP1	ENSMPUP00000007605	ENSMPUP00000018013	Senescence downregulated leo1-like protein.	Telomerase associated protein 1.	0.856
G9K828_MUSPF	TTC8	ENSMPUP00000007605	ENSMPUP00000008119	Senescence downregulated leo1-like protein.	Tetratricopeptide repeat domain 8.	0.749
IFIT2	BBS7	ENSMPUP00000006434	ENSMPUP00000017294	Interferon induced protein with tetratricopeptide repeats 2.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.504
IFIT2	BBS9	ENSMPUP00000006434	ENSMPUP00000005532	Interferon induced protein with tetratricopeptide repeats 2.	Bardet-Biedl syndrome 9.	0.538
IFIT2	CDC73	ENSMPUP00000006434	ENSMPUP00000004608	Interferon induced protein with tetratricopeptide repeats 2.	Cell division cycle 73.	0.493
IFIT2	G9K828_MUSPF	ENSMPUP00000006434	ENSMPUP00000007605	Interferon induced protein with tetratricopeptide repeats 2.	Senescence downregulated leo1-like protein.	0.749