STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRBV16T cell receptor beta variable 16 (gene/pseudogene). (118 aa)    
Predicted Functional Partners:
TRAV29DV5
T cell receptor alpha variable 29/delta variable 5 (gene/pseudogene).
  
 
  0.629
M3YDZ3_MUSPF
MHC_II_alpha domain-containing protein.
    
  0.574
LOC101678178
Ig-like domain-containing protein; Belongs to the MHC class II family.
    
  0.574
M3Y7P9_MUSPF
Ig-like domain-containing protein.
  
  
  0.551
M3Y7Z0_MUSPF
Ig-like domain-containing protein.
  
 
  0.534
M3Y7X6_MUSPF
Ig-like domain-containing protein.
  
 
  0.529
M3Y7V8_MUSPF
Ig-like domain-containing protein.
  
 
  0.522
M3Y7Q7_MUSPF
Ig-like domain-containing protein.
  
 
  0.511
M3Y7U7_MUSPF
Ig-like domain-containing protein.
  
 
   0.500
M3Y7S7_MUSPF
Ig-like domain-containing protein.
  
 
  0.483
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.