STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM126ATransmembrane protein 126A. (197 aa)    
Predicted Functional Partners:
TMEM109
Transmembrane protein 109.
      
 0.814
NDUFAF1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
   
 
 0.779
M3XVD5_MUSPF
Uncharacterized protein.
      
 0.765
SEC11C
Signal peptidase complex catalytic subunit SEC11.
   
  
 0.762
RTN4IP1
Reticulon 4 interacting protein 1.
   
  
 0.741
MARCHF5
Membrane associated ring-CH-type finger 5.
      
 0.741
ECSIT
ECSIT signalling integrator.
     
 0.738
TMUB1
Transmembrane and ubiquitin like domain containing 1.
      
 0.731
ACADVL
Acyl-CoA dehydrogenase very long chain.
     
 0.716
SSBP1
Single-stranded DNA binding protein 1 isoform 1.
   
 
 0.710
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.