STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM178ATransmembrane protein 178A. (297 aa)    
Predicted Functional Partners:
TMEM94
Transmembrane protein 94.
      
 0.816
PTCHD4
Patched domain containing 4.
   
  
 0.722
G9KDD1_MUSPF
Nicolin 1.
      
 0.685
MYPN
Myopalladin.
      
 0.643
TMEM204
Transmembrane protein 204.
   
  
 0.640
TMEM97
Transmembrane protein 97.
      
 0.639
SLC4A11
Solute carrier family 4 member 11.
      
 0.624
TRPM3
Transient receptor potential cation channel subfamily M member 3.
      
 0.534
CHRDL2
Chordin like 2.
      
 0.519
FTSJ3
pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
      
 0.511
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.