Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CD44 | COL1A1 | ENSMPUP00000011598 | ENSMPUP00000015328 | CD44 molecule (Indian blood group). | Collagen type I alpha 1 chain. | 0.970 |
CD44 | ERBB2 | ENSMPUP00000011598 | ENSMPUP00000014872 | CD44 molecule (Indian blood group). | Receptor protein-tyrosine kinase. | 0.974 |
CD44 | EZR | ENSMPUP00000011598 | ENSMPUP00000005146 | CD44 molecule (Indian blood group). | Ezrin. | 0.954 |
CD44 | IQGAP1 | ENSMPUP00000011598 | ENSMPUP00000015520 | CD44 molecule (Indian blood group). | IQ motif containing GTPase activating protein 1. | 0.963 |
CD44 | MMP9 | ENSMPUP00000011598 | ENSMPUP00000017496 | CD44 molecule (Indian blood group). | Matrix metallopeptidase 9. | 0.964 |
CD44 | NANOG | ENSMPUP00000011598 | ENSMPUP00000016627 | CD44 molecule (Indian blood group). | Homeobox domain-containing protein. | 0.980 |
CD44 | RDX | ENSMPUP00000011598 | ENSMPUP00000003302 | CD44 molecule (Indian blood group). | Radixin. | 0.960 |
CD44 | SELE | ENSMPUP00000011598 | ENSMPUP00000015419 | CD44 molecule (Indian blood group). | Selectin E. | 0.955 |
CD44 | SPP1 | ENSMPUP00000011598 | ENSMPUP00000002209 | CD44 molecule (Indian blood group). | Secreted phosphoprotein 1. | 0.998 |
CD44 | TIAM1 | ENSMPUP00000011598 | ENSMPUP00000001054 | CD44 molecule (Indian blood group). | T cell lymphoma invasion and metastasis 1. | 0.960 |
COL1A1 | CD44 | ENSMPUP00000015328 | ENSMPUP00000011598 | Collagen type I alpha 1 chain. | CD44 molecule (Indian blood group). | 0.970 |
COL1A1 | MMP9 | ENSMPUP00000015328 | ENSMPUP00000017496 | Collagen type I alpha 1 chain. | Matrix metallopeptidase 9. | 0.561 |
COL1A1 | NANOG | ENSMPUP00000015328 | ENSMPUP00000016627 | Collagen type I alpha 1 chain. | Homeobox domain-containing protein. | 0.410 |
COL1A1 | SPP1 | ENSMPUP00000015328 | ENSMPUP00000002209 | Collagen type I alpha 1 chain. | Secreted phosphoprotein 1. | 0.709 |
ERBB2 | CD44 | ENSMPUP00000014872 | ENSMPUP00000011598 | Receptor protein-tyrosine kinase. | CD44 molecule (Indian blood group). | 0.974 |
EZR | CD44 | ENSMPUP00000005146 | ENSMPUP00000011598 | Ezrin. | CD44 molecule (Indian blood group). | 0.954 |
EZR | MMP9 | ENSMPUP00000005146 | ENSMPUP00000017496 | Ezrin. | Matrix metallopeptidase 9. | 0.500 |
EZR | RDX | ENSMPUP00000005146 | ENSMPUP00000003302 | Ezrin. | Radixin. | 0.996 |
IQGAP1 | CD44 | ENSMPUP00000015520 | ENSMPUP00000011598 | IQ motif containing GTPase activating protein 1. | CD44 molecule (Indian blood group). | 0.963 |
IQGAP1 | TIAM1 | ENSMPUP00000015520 | ENSMPUP00000001054 | IQ motif containing GTPase activating protein 1. | T cell lymphoma invasion and metastasis 1. | 0.405 |
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