STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WASHC4WASH complex subunit 4. (1172 aa)    
Predicted Functional Partners:
WASHC5
WASH complex subunit 5.
  
 0.942
WASHC3
WASH complex subunit 3.
    
 0.912
WASHC1
WASH complex subunit 1.
    
 0.836
CUTA
CutA divalent cation tolerance homolog.
      
 0.746
UBR1
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
    0.701
M3YDL5_MUSPF
CAP-ZIP_m domain-containing protein.
   
 
 0.680
SLF2
SMC5-SMC6 complex localization factor 2.
   
 
 0.574
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
   
 0.547
ANKRD13B
Ankyrin repeat domain 13B.
      
 0.526
SNX27
Sorting nexin 27.
    
 0.521
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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