STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF144ARBR-type E3 ubiquitin transferase. (385 aa)    
Predicted Functional Partners:
PRKDC
Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family.
    
 0.943
VXN
Vexin.
      
 0.692
ATRIP
ATR interacting protein.
      
 0.692
NOL4L
Nucleolar protein 4 like.
      
 0.668
EIPR1
EARP complex and GARP complex interacting protein 1.
      
 0.656
DCDC2C
Doublecortin domain containing 2C.
      
 0.656
TRAPPC12
Trafficking protein particle complex 12.
      
 0.640
RNF216
Ring finger protein 216.
    
0.617
RPS27A
Ubiquitin-like domain-containing protein.
    
 0.597
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.592
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.