WDR64 protein (Mustela putorius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

WDR64

WD repeat domain 64. (1087 aa)

Predicted Functional Partners:

CTTNBP2NL

0.623

MOB4

0.622

GPR35

0.619

M3Z8H0_MUSPF

0.612

STRIP1

0.596

STRIP2

0.596

PDCD10

0.575

APEX2

0.550

TTLL7

0.526

RGS7

0.516

Your Current Organism:

Mustela putorius

NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APEX2	GPR35	ENSMPUP00000003261	ENSMPUP00000019304	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	G protein-coupled receptor 35; Belongs to the G-protein coupled receptor 1 family.	0.457
APEX2	WDR64	ENSMPUP00000003261	ENSMPUP00000015599	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	WD repeat domain 64.	0.550
CTTNBP2NL	MOB4	ENSMPUP00000004913	ENSMPUP00000007852	CTTNBP2 N-terminal like.	MOB1, Mps One Binder kinase activator-like 3.	0.916
CTTNBP2NL	PDCD10	ENSMPUP00000004913	ENSMPUP00000016967	CTTNBP2 N-terminal like.	Programmed cell death 10.	0.955
CTTNBP2NL	STRIP1	ENSMPUP00000004913	ENSMPUP00000003740	CTTNBP2 N-terminal like.	Striatin interacting protein 1.	0.975
CTTNBP2NL	STRIP2	ENSMPUP00000004913	ENSMPUP00000005399	CTTNBP2 N-terminal like.	Striatin interacting protein 2.	0.939
CTTNBP2NL	WDR64	ENSMPUP00000004913	ENSMPUP00000015599	CTTNBP2 N-terminal like.	WD repeat domain 64.	0.623
GPR35	APEX2	ENSMPUP00000019304	ENSMPUP00000003261	G protein-coupled receptor 35; Belongs to the G-protein coupled receptor 1 family.	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	0.457
GPR35	WDR64	ENSMPUP00000019304	ENSMPUP00000015599	G protein-coupled receptor 35; Belongs to the G-protein coupled receptor 1 family.	WD repeat domain 64.	0.619
M3Z8H0_MUSPF	TTLL7	ENSMPUP00000019884	ENSMPUP00000005727	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Tubulin tyrosine ligase like 7.	0.486
M3Z8H0_MUSPF	WDR64	ENSMPUP00000019884	ENSMPUP00000015599	Sulfotransferase; Belongs to the sulfotransferase 1 family.	WD repeat domain 64.	0.612
MOB4	CTTNBP2NL	ENSMPUP00000007852	ENSMPUP00000004913	MOB1, Mps One Binder kinase activator-like 3.	CTTNBP2 N-terminal like.	0.916
MOB4	PDCD10	ENSMPUP00000007852	ENSMPUP00000016967	MOB1, Mps One Binder kinase activator-like 3.	Programmed cell death 10.	0.911
MOB4	STRIP1	ENSMPUP00000007852	ENSMPUP00000003740	MOB1, Mps One Binder kinase activator-like 3.	Striatin interacting protein 1.	0.934
MOB4	STRIP2	ENSMPUP00000007852	ENSMPUP00000005399	MOB1, Mps One Binder kinase activator-like 3.	Striatin interacting protein 2.	0.916
MOB4	WDR64	ENSMPUP00000007852	ENSMPUP00000015599	MOB1, Mps One Binder kinase activator-like 3.	WD repeat domain 64.	0.622
PDCD10	CTTNBP2NL	ENSMPUP00000016967	ENSMPUP00000004913	Programmed cell death 10.	CTTNBP2 N-terminal like.	0.955
PDCD10	MOB4	ENSMPUP00000016967	ENSMPUP00000007852	Programmed cell death 10.	MOB1, Mps One Binder kinase activator-like 3.	0.911
PDCD10	STRIP1	ENSMPUP00000016967	ENSMPUP00000003740	Programmed cell death 10.	Striatin interacting protein 1.	0.967
PDCD10	STRIP2	ENSMPUP00000016967	ENSMPUP00000005399	Programmed cell death 10.	Striatin interacting protein 2.	0.820