STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMIM3Small integral membrane protein 3. (60 aa)    
Predicted Functional Partners:
NOCT
Nocturnin.
      
 0.750
TLCD4-RWDD3
TLCD4-RWDD3 readthrough.
      
 0.740
SPRED3
Sprouty related EVH1 domain containing 3.
      
 0.622
TMEM40
Transmembrane protein 40.
      
 0.618
C19orf54
Chromosome 19 open reading frame 54.
      
 0.544
FAM174A
Family with sequence similarity 174 member A.
      
 0.526
LHFPL1
LHFPL tetraspan subfamily member 1.
      
 0.526
TTC17
Tetratricopeptide repeat domain 17.
      
 0.526
KCTD14
Potassium channel tetramerization domain containing 14.
      
 0.526
HEATR5B
HEAT repeat containing 5B.
      
 0.526
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.