STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_0015Hypothetical protein. (119 aa)    
Predicted Functional Partners:
Tchl_0136
Putative DNA-binding protein in cluster with Type I restriction-modification system.
  
    0.567
Tchl_0006
Type I restriction-modification system, specificity subunit S.
  
    0.524
Tchl_0821
Type I restriction-modification system, specificity subunit S.
  
    0.524
Tchl_0012
Type I restriction-modification system, restriction subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
   
    0.523
Tchl_0815
Type I restriction-modification system, restriction subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
   
    0.523
Tchl_0016
Hypothetical protein.
       0.479
Tchl_0017
Hypothetical protein.
       0.479
Tchl_0013
ParE family plasmid stabilization system protein.
       0.408
Tchl_0014
copG family protein.
       0.408
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.