STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_0024ATPase. (433 aa)    
Predicted Functional Partners:
Tchl_0023
Hypothetical protein.
       0.693
Tchl_2127
Hypothetical protein.
 
     0.660
Tchl_2296
Fic family regulatory protein.
 
     0.579
Tchl_1476
Fic family protein.
 
     0.560
Tchl_0908
ATP-dependent DNA helicase.
 
     0.552
Tchl_0913
HipA-like protein.
  
     0.524
Tchl_0022
Hypothetical protein.
       0.509
Tchl_0025
Putative metal-dependent hydrolase.
       0.465
Tchl_0822
Hypothetical protein.
 
     0.455
Tchl_1127
RecG-like protein.
 
     0.402
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.