Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tchl_0517 | Tchl_0518 | Tchl_0517 | Tchl_0518 | Hypothetical protein. | RNA helicase HrpA. | 0.560 |
Tchl_0517 | Tchl_0559 | Tchl_0517 | Tchl_0559 | Hypothetical protein. | Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL. | 0.476 |
Tchl_0517 | Tchl_0560 | Tchl_0517 | Tchl_0560 | Hypothetical protein. | Nitrous oxide reductase maturation membrane protein NosY. | 0.495 |
Tchl_0517 | Tchl_0562 | Tchl_0517 | Tchl_0562 | Hypothetical protein. | Nitrous oxide reductase maturation protein NosD. | 0.470 |
Tchl_0517 | Tchl_0564 | Tchl_0517 | Tchl_0564 | Hypothetical protein. | Nitrous oxide reductase maturation protein NosR. | 0.480 |
Tchl_0517 | Tchl_0565 | Tchl_0517 | Tchl_0565 | Hypothetical protein. | Nitrous-oxide reductase. | 0.464 |
Tchl_0517 | Tchl_1899 | Tchl_0517 | Tchl_1899 | Hypothetical protein. | NnrS protein involved in response to NO. | 0.457 |
Tchl_0517 | Tchl_2470 | Tchl_0517 | Tchl_2470 | Hypothetical protein. | NnrS family protein. | 0.556 |
Tchl_0517 | modC | Tchl_0517 | Tchl_1321 | Hypothetical protein. | Molybdenum transport ATP-binding protein ModC; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. | 0.481 |
Tchl_0517 | uppP | Tchl_0517 | Tchl_0516 | Hypothetical protein. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.456 |
Tchl_0518 | Tchl_0517 | Tchl_0518 | Tchl_0517 | RNA helicase HrpA. | Hypothetical protein. | 0.560 |
Tchl_0559 | Tchl_0517 | Tchl_0559 | Tchl_0517 | Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL. | Hypothetical protein. | 0.476 |
Tchl_0559 | Tchl_0560 | Tchl_0559 | Tchl_0560 | Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL. | Nitrous oxide reductase maturation membrane protein NosY. | 0.993 |
Tchl_0559 | Tchl_0562 | Tchl_0559 | Tchl_0562 | Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL. | Nitrous oxide reductase maturation protein NosD. | 0.994 |
Tchl_0559 | Tchl_0564 | Tchl_0559 | Tchl_0564 | Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL. | Nitrous oxide reductase maturation protein NosR. | 0.955 |
Tchl_0559 | Tchl_0565 | Tchl_0559 | Tchl_0565 | Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL. | Nitrous-oxide reductase. | 0.921 |
Tchl_0559 | Tchl_2470 | Tchl_0559 | Tchl_2470 | Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL. | NnrS family protein. | 0.597 |
Tchl_0560 | Tchl_0517 | Tchl_0560 | Tchl_0517 | Nitrous oxide reductase maturation membrane protein NosY. | Hypothetical protein. | 0.495 |
Tchl_0560 | Tchl_0559 | Tchl_0560 | Tchl_0559 | Nitrous oxide reductase maturation membrane protein NosY. | Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL. | 0.993 |
Tchl_0560 | Tchl_0562 | Tchl_0560 | Tchl_0562 | Nitrous oxide reductase maturation membrane protein NosY. | Nitrous oxide reductase maturation protein NosD. | 0.997 |
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