STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_0517Hypothetical protein. (173 aa)    
Predicted Functional Partners:
Tchl_0518
RNA helicase HrpA.
     
 0.560
Tchl_2470
NnrS family protein.
 
     0.556
Tchl_0560
Nitrous oxide reductase maturation membrane protein NosY.
  
     0.495
modC
Molybdenum transport ATP-binding protein ModC; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.
      0.481
Tchl_0564
Nitrous oxide reductase maturation protein NosR.
  
     0.480
Tchl_0559
Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL.
  
     0.476
Tchl_0562
Nitrous oxide reductase maturation protein NosD.
  
     0.470
Tchl_0565
Nitrous-oxide reductase.
 
     0.464
Tchl_1899
NnrS protein involved in response to NO.
 
     0.457
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.456
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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