STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_0731Glycosyl transferase. (250 aa)    
Predicted Functional Partners:
Tchl_0740
Lysophospholipid acyltransferase.
     0.979
Tchl_0730
Lysophospholipid acyltransferase.
 
   
 0.944
Tchl_0737
Polysaccharide deacetylase.
 
  
 0.846
Tchl_0744
Acyl carrier protein.
 
 
 0.824
Tchl_0742
acyl-CoA synthetase.
 
   
 0.818
Tchl_0738
Putative exporter.
 
    0.810
Tchl_0739
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
    0.806
Tchl_0734
3-oxoacyl-[ACP] synthase.
 
   
 0.803
Tchl_0743
Hypothetical protein.
 
     0.801
Tchl_0733
3-hydroxydecanoyl-[ACP] dehydratase.
 
     0.800
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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