STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_1069TRAP dicarboxylate transporter- DctP subunit. (341 aa)    
Predicted Functional Partners:
Tchl_1068
TRAP dicarboxylate transporter, DctM subunit.
 
 
 0.978
Tchl_1071
TRAP dicarboxylate transporter, DctM subunit.
 
 
 0.956
Tchl_1073
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
  
  0.952
Tchl_1072
TRAP-type C4-dicarboxylate transport system, small permease component.
  
 
 0.949
Tchl_1065
TRAP dicarboxylate transporter- DctP subunit.
  
  
 
0.901
Tchl_1066
TRAP dicarboxylate transporter- DctP subunit.
  
  
 
0.901
Tchl_1067
TRAP dicarboxylate transporter, DctQ subunit.
 
  
 0.818
Tchl_0235
TRAP dicarboxylate transporter, DctM subunit.
 
  
 0.765
Tchl_2089
Aromatic dicarboxylate transporter, DctM subunit.
 
  
 0.754
Tchl_2262
TRAP transporter, DctM subunit.
 
  
 0.589
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.