STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_1304ABC drug transporter, permease component YbhR-like. (375 aa)    
Predicted Functional Partners:
Tchl_1306
ABC transporter multidrug efflux pump, ATP-binding protein YbhF.
  
 0.996
Tchl_1307
ABC drug transporter, membrane protein YbhG-like.
  
 0.981
Tchl_0561
Nitrous oxide reductase maturation protein NosF (ATPase).
 
  
 0.939
Tchl_0626
ABC-type multidrug transport system, ATPase component.
 
  
 0.939
Tchl_1532
Lipopolysaccharide ABC transporter, ATP-binding protein LptB.
   
 0.935
Tchl_2995
Branched-chain amino acid transport ATP-binding protein LivG.
 
      0.899
Tchl_3008
Hydroxybenzoate transport ATP-binding protein.
 
      0.899
Tchl_3402
Benzoate transport, ATP binding protein.
 
      0.893
Tchl_1305
ABC drug transporter, permease component YbhS-like.
 
  
 
0.883
Tchl_1112
Benzoate transporter, ATP binding protein.
 
      0.882
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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