STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_1481Benzoquinone dehydrogenase, small subunit BqdS; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (441 aa)    
Predicted Functional Partners:
Tchl_1479
Benzoquinone dehydrogenase, large subunit BqdL.
 0.999
Tchl_1475
Benzoquinone dehydrogenase BqdM.
 0.995
Tchl_2325
Dihydrolipoyl dehydrogenase.
 0.993
Tchl_1009
Pyruvate/acetoin dehydrogenase E1 component beta-subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
 0.989
Tchl_3130
Pyruvate dehydrogenase, dihydrolipoamide dehydrogenase.
 0.987
Tchl_2254
Branched-chain alpha-keto acid dehydrogenase, E1component, beta subunit.
 0.985
pdhA
Pyruvate/acetoin dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 0.980
pdhA-2
Branched-chain alpha-keto acid dehydrogenase, E1component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).
 0.964
Tchl_2323
2-oxoglutarate dehydrogenase E1 component.
 0.956
Tchl_2322
Citrate synthase (si); Belongs to the citrate synthase family.
  
 0.952
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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