STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_1511Hypothetical protein. (219 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
    0.807
Tchl_1512
NAD-dependent deacetylase.
       0.773
Tchl_1340
Modification methyltransferase.
  
     0.657
Tchl_1509
Exodeoxyribonuclease III.
  
    0.629
Tchl_2670
Transcriptional regulator, TetR family.
  
     0.591
Tchl_2332
Phasin protein.
  
     0.496
Tchl_1508
Diguanylate cyclase/phosphodiesterase.
       0.480
Tchl_3342
ObrB family porin.
  
     0.477
Tchl_1712
Histidine kinase.
  
     0.476
Tchl_1824
Hypothetical protein.
  
     0.453
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.