Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tchl_0440 | Tchl_0764 | Tchl_0440 | Tchl_0764 | Glutathione S-transferase family protein. | Gamma-glutamyltranspeptidase. | 0.904 |
Tchl_0440 | Tchl_1521 | Tchl_0440 | Tchl_1521 | Glutathione S-transferase family protein. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.435 |
Tchl_0440 | Tchl_1523 | Tchl_0440 | Tchl_1523 | Glutathione S-transferase family protein. | Glutathione S-transferase. | 0.902 |
Tchl_0440 | Tchl_2220 | Tchl_0440 | Tchl_2220 | Glutathione S-transferase family protein. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.931 |
Tchl_0440 | Tchl_2335 | Tchl_0440 | Tchl_2335 | Glutathione S-transferase family protein. | Glutathione reductase. | 0.915 |
Tchl_0440 | gshB | Tchl_0440 | Tchl_1347 | Glutathione S-transferase family protein. | Glutathione synthetase; Belongs to the prokaryotic GSH synthase family. | 0.918 |
Tchl_0440 | rpoA | Tchl_0440 | Tchl_1776 | Glutathione S-transferase family protein. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.685 |
Tchl_0440 | rpoC | Tchl_0440 | Tchl_1745 | Glutathione S-transferase family protein. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.586 |
Tchl_0764 | Tchl_0440 | Tchl_0764 | Tchl_0440 | Gamma-glutamyltranspeptidase. | Glutathione S-transferase family protein. | 0.904 |
Tchl_0764 | Tchl_1523 | Tchl_0764 | Tchl_1523 | Gamma-glutamyltranspeptidase. | Glutathione S-transferase. | 0.904 |
Tchl_0764 | Tchl_2220 | Tchl_0764 | Tchl_2220 | Gamma-glutamyltranspeptidase. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.905 |
Tchl_0764 | Tchl_2335 | Tchl_0764 | Tchl_2335 | Gamma-glutamyltranspeptidase. | Glutathione reductase. | 0.921 |
Tchl_0764 | gshB | Tchl_0764 | Tchl_1347 | Gamma-glutamyltranspeptidase. | Glutathione synthetase; Belongs to the prokaryotic GSH synthase family. | 0.919 |
Tchl_1521 | Tchl_0440 | Tchl_1521 | Tchl_0440 | Glutathione S-transferase; Belongs to the GST superfamily. | Glutathione S-transferase family protein. | 0.435 |
Tchl_1521 | Tchl_1523 | Tchl_1521 | Tchl_1523 | Glutathione S-transferase; Belongs to the GST superfamily. | Glutathione S-transferase. | 0.762 |
Tchl_1521 | Tchl_1524 | Tchl_1521 | Tchl_1524 | Glutathione S-transferase; Belongs to the GST superfamily. | SDR oxidoreductase. | 0.449 |
Tchl_1521 | Tchl_2335 | Tchl_1521 | Tchl_2335 | Glutathione S-transferase; Belongs to the GST superfamily. | Glutathione reductase. | 0.515 |
Tchl_1521 | cca | Tchl_1521 | Tchl_1522 | Glutathione S-transferase; Belongs to the GST superfamily. | tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. | 0.535 |
Tchl_1521 | rpoA | Tchl_1521 | Tchl_1776 | Glutathione S-transferase; Belongs to the GST superfamily. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.685 |
Tchl_1521 | rpoC | Tchl_1521 | Tchl_1745 | Glutathione S-transferase; Belongs to the GST superfamily. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.586 |
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