STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_1582Pyruvate:Oxaloacetate transcarboxylase domain protein. (495 aa)    
Predicted Functional Partners:
Tchl_1583
Methylcrotonyl-CoA carboxylase biotin-containingsubunit.
  
 
 0.990
Tchl_0848
Biotin carboxylase of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
  
 0.974
Tchl_1559
Methylcrotonyl-CoA carboxylase biotin-containingsubunit.
  
 
 0.959
Tchl_1704
Propionyl-CoA carboxylase biotin-containing subunit.
  
 
 0.959
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
    
 0.940
Tchl_0793
NADP-dependent malic enzyme.
    
 0.939
Tchl_2018
NADP-dependent malic enzyme; Belongs to the malic enzymes family.
    
 0.939
Tchl_2143
2-oxoglutarate oxidoreductase, alpha subunit.
  
 
 0.939
Tchl_3347
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.920
Tchl_0849
Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
    0.919
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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