STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_1914Ferredoxin. (159 aa)    
Predicted Functional Partners:
Tchl_1915
Putative aldehyde:ferredoxin oxidoreductase.
 
 0.968
Tchl_1916
ferredoxin:NADH oxidoreductase.
 
   
 0.865
Tchl_0487
Formate dehydrogenase large subunit FdhA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.834
Tchl_1917
Molybdenum cofactor biosynthesis protein MoaD.
 
   
 0.834
Tchl_0490
Formate dehydrogenase, membrane subunit FdhC.
 
 
 0.787
Tchl_1362
Octaheme cytochrome.
  
 
 0.782
Tchl_2138
phenylacetyl-CoA:acceptor oxidoreductase-like protein, small subunit PadC.
  
     0.772
Tchl_0103
phenylacetyl-CoA:acceptor oxidoreductase small subunit PadC.
  
     0.771
Tchl_2117
Putative aldehyde:ferredoxin oxidoreductase.
 
 0.756
Tchl_2139
phenylacetyl-CoA:acceptor oxidoreductase-like protein, large subunit PadB; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.743
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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