STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_2099Thioesterase, PaaD-like. (163 aa)    
Predicted Functional Partners:
Tchl_2101
Phenylacetate-CoA oxygenase, PaaG subunit.
 
 
 0.991
Tchl_2102
Phenylacetate-CoA oxygenase, PaaH subunit.
 
 
 0.991
Tchl_2103
Phenylacetate-CoA oxygenase, PaaI subunit.
 
 
 0.990
Tchl_2100
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.989
Tchl_2104
Phenylacetate-CoA oxygenase, PaaJ subunit.
 
 
 0.988
Tchl_2105
Phenylacetate-CoA oxygenase/reductase, PaaK subunit.
 
 
  0.982
Tchl_2131
Phenylacetate-coenzyme A ligase PadJ; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.965
Tchl_0104
phenylacetyl-CoA:acceptor oxidoreductase large subunit PadB; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.902
Tchl_0789
Phenylacetyl-CoA:acceptor oxidoreductase PadB-like protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.902
Tchl_2139
phenylacetyl-CoA:acceptor oxidoreductase-like protein, large subunit PadB; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.902
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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