STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_2214Iron-sulfur cluster assembly ATPase protein SufC. (261 aa)    
Predicted Functional Partners:
Tchl_2212
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 0.999
Tchl_2213
Iron-sulfur cluster assembly protein SufD.
 
 0.999
Tchl_2215
Iron-sulfur cluster assembly protein SufB.
 
 0.999
Tchl_2211
Iron-sulfur cluster assembly scaffold protein, SufE2.
 
  
 0.981
Tchl_2210
Fe-S cluster assembly protein, DUF59 family.
 
  
 0.920
Tchl_2792
Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
  
  
 0.825
Tchl_2216
Iron-sulfur cluster regulator IscR.
 
   
 0.783
Tchl_1818
PaaD-like protein.
 
  
 0.747
Tchl_2791
Iron binding protein IscA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family.
  
 
 0.698
erpA
Iron-sulfur cluster insertion protein ErpA; Required for insertion of 4Fe-4S clusters.
  
 
 0.501
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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