Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tchl_2231 | Tchl_2233 | Tchl_2231 | Tchl_2233 | DUF808 protein. | Chromosome segregation protein SMC-like. | 0.503 |
Tchl_2231 | Tchl_2235 | Tchl_2231 | Tchl_2235 | DUF808 protein. | Hypothetical protein. | 0.503 |
Tchl_2231 | Tchl_2236 | Tchl_2231 | Tchl_2236 | DUF808 protein. | Hypothetical protein. | 0.463 |
Tchl_2231 | Tchl_2238 | Tchl_2231 | Tchl_2238 | DUF808 protein. | Hypothetical protein. | 0.440 |
Tchl_2231 | lysS | Tchl_2231 | Tchl_2232 | DUF808 protein. | Lysyl-tRNA synthetase (class II); Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.774 |
Tchl_2231 | prfB | Tchl_2231 | Tchl_2237 | DUF808 protein. | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.440 |
Tchl_2231 | trmA | Tchl_2231 | Tchl_2234 | DUF808 protein. | tRNA (uracil(54)-C5)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA). | 0.508 |
Tchl_2233 | Tchl_2231 | Tchl_2233 | Tchl_2231 | Chromosome segregation protein SMC-like. | DUF808 protein. | 0.503 |
Tchl_2233 | Tchl_2235 | Tchl_2233 | Tchl_2235 | Chromosome segregation protein SMC-like. | Hypothetical protein. | 0.800 |
Tchl_2233 | Tchl_2236 | Tchl_2233 | Tchl_2236 | Chromosome segregation protein SMC-like. | Hypothetical protein. | 0.741 |
Tchl_2233 | Tchl_2238 | Tchl_2233 | Tchl_2238 | Chromosome segregation protein SMC-like. | Hypothetical protein. | 0.664 |
Tchl_2233 | Tchl_2239 | Tchl_2233 | Tchl_2239 | Chromosome segregation protein SMC-like. | Benzoyl-CoA-dihydrodiol lyase BoxC. | 0.497 |
Tchl_2233 | Tchl_2240 | Tchl_2233 | Tchl_2240 | Chromosome segregation protein SMC-like. | Putative Fe2+/Mn2+ transporter. | 0.433 |
Tchl_2233 | lysS | Tchl_2233 | Tchl_2232 | Chromosome segregation protein SMC-like. | Lysyl-tRNA synthetase (class II); Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.517 |
Tchl_2233 | prfB | Tchl_2233 | Tchl_2237 | Chromosome segregation protein SMC-like. | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.688 |
Tchl_2233 | trmA | Tchl_2233 | Tchl_2234 | Chromosome segregation protein SMC-like. | tRNA (uracil(54)-C5)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA). | 0.773 |
Tchl_2235 | Tchl_2231 | Tchl_2235 | Tchl_2231 | Hypothetical protein. | DUF808 protein. | 0.503 |
Tchl_2235 | Tchl_2233 | Tchl_2235 | Tchl_2233 | Hypothetical protein. | Chromosome segregation protein SMC-like. | 0.800 |
Tchl_2235 | Tchl_2236 | Tchl_2235 | Tchl_2236 | Hypothetical protein. | Hypothetical protein. | 0.741 |
Tchl_2235 | Tchl_2238 | Tchl_2235 | Tchl_2238 | Hypothetical protein. | Hypothetical protein. | 0.664 |
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