STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_2243ABC transporter, ATPase component. (265 aa)    
Predicted Functional Partners:
Tchl_2244
ABC transporter, transmembrane component.
  
 0.986
Tchl_2245
ABC transporter substrate-binding protein.
 
  
 0.975
Tchl_1320
Molybdenum transport system permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
    
 0.895
Tchl_2468
ABC transporter, transmembrane component.
  
 0.841
Tchl_0626
ABC-type multidrug transport system, ATPase component.
 
   
0.840
Tchl_0086
ABC transporter, ATP binding/permease protein.
    
0.816
Tchl_0825
Macrolide family ABC transporter permease protein.
 
      0.812
Tchl_0824
Macrolide family ABC transporter.
 
      0.762
Tchl_0588
MdlB-like ATP-binding/permease protein.
     
0.655
Tchl_2467
Periplasmic binding protein.
  
  
 0.611
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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