STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_2666Hexachlorocyclohexane uptake ABC-type transporter-like, periplasmic binding protein. (314 aa)    
Predicted Functional Partners:
Tchl_2664
Hexachlorocyclohexane uptake ABC-type transporter-like, permease.
 
 0.997
Tchl_2665
Hexachlorocyclohexane uptake ABC-type transporter-like, ATPase.
 
 0.997
Tchl_0621
Phospholipid ABC transporter permease, MlaE-like.
  
 0.959
Tchl_2667
ABC-type transport auxiliary lipoprotein component.
 
   0.956
Tchl_0620
Phospholipid ABC transporter ATP-binding protein, MlaF-like.
  
 0.950
Tchl_0624
Phospholipid ABC transporter ATP-binding protein, MlaC-like.
  
 0.911
Tchl_0622
Phospholipid ABC transporter periplasmic binding protein, MlaB-like.
     
 0.907
Tchl_0625
STAS super family protein.
  
 0.863
Tchl_3199
STAS domain protein.
  
   0.841
Tchl_2663
Exopolyphosphatase.
       0.795
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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