STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_2693Putative MFS permease. (426 aa)    
Predicted Functional Partners:
Tchl_2692
NAD-reducing hydrogenase subunit HoxF.
       0.776
Tchl_2690
NAD-reducing hydrogenase subunit HoxY.
       0.773
Tchl_2691
NAD-reducing hydrogenase subunit HoxU.
       0.773
Tchl_2750
UPF0246 protein YaaA; Belongs to the UPF0246 family.
  
    0.737
Tchl_2689
NAD-reducing hydrogenase subunit HoxH; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
       0.556
Tchl_2086
Indolepyruvate oxidoreductase subunit IorB II.
  
     0.469
Tchl_2694
Ubiquinone biosynthesis monooxygenase UbiB.
     
 0.433
Tchl_1077
Gentisate 1,2-dioxygenase NagI.
  
     0.418
Tchl_2688
Ni,Fe-hydrogenase maturation protease HoxW.
       0.414
Tchl_2087
Indolepyruvate oxidoreductase subunit IorA.
  
     0.402
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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