STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_2716Glycosyl transferase, family 2. (224 aa)    
Predicted Functional Partners:
Tchl_2715
Putative glycosyl transferase.
     0.995
Tchl_2717
Putative membrane-bound pyridine dinucleotide oxidoreductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
  
 0.935
Tchl_2720
Radical SAM/Cys-rich domain protein.
 
   
 0.790
Tchl_2726
Hypothetical protein.
 
   
 0.783
Tchl_2718
Hypothetical protein.
  
 
 0.776
Tchl_2721
Class I SAM-dependent methyltransferase.
  
   
 0.703
Tchl_2954
Sensory box histidine kinase/response regulator.
  
 
 0.676
Tchl_0737
Polysaccharide deacetylase.
  
  
 0.631
Tchl_2228
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
  
 
 0.623
Tchl_2473
Diguanylate cyclase.
  
 
 0.615
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.