Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tchl_2211 | Tchl_2787 | Tchl_2211 | Tchl_2787 | Iron-sulfur cluster assembly scaffold protein, SufE2. | Fe-S assembly protein IscX. | 0.568 |
Tchl_2211 | Tchl_2788 | Tchl_2211 | Tchl_2788 | Iron-sulfur cluster assembly scaffold protein, SufE2. | Ferredoxin, 2Fe-2S. | 0.831 |
Tchl_2211 | Tchl_2791 | Tchl_2211 | Tchl_2791 | Iron-sulfur cluster assembly scaffold protein, SufE2. | Iron binding protein IscA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family. | 0.818 |
Tchl_2211 | Tchl_2794 | Tchl_2211 | Tchl_2794 | Iron-sulfur cluster assembly scaffold protein, SufE2. | Cysteine desulfurase. | 0.950 |
Tchl_2211 | Tchl_2795 | Tchl_2211 | Tchl_2795 | Iron-sulfur cluster assembly scaffold protein, SufE2. | Iron-sulfur cluster regulator IscR. | 0.824 |
Tchl_2211 | hscB | Tchl_2211 | Tchl_2790 | Iron-sulfur cluster assembly scaffold protein, SufE2. | Chaperone protein HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. | 0.967 |
Tchl_2211 | iscS | Tchl_2211 | Tchl_2793 | Iron-sulfur cluster assembly scaffold protein, SufE2. | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | 0.950 |
Tchl_2787 | Tchl_2211 | Tchl_2787 | Tchl_2211 | Fe-S assembly protein IscX. | Iron-sulfur cluster assembly scaffold protein, SufE2. | 0.568 |
Tchl_2787 | Tchl_2788 | Tchl_2787 | Tchl_2788 | Fe-S assembly protein IscX. | Ferredoxin, 2Fe-2S. | 0.994 |
Tchl_2787 | Tchl_2791 | Tchl_2787 | Tchl_2791 | Fe-S assembly protein IscX. | Iron binding protein IscA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family. | 0.923 |
Tchl_2787 | Tchl_2792 | Tchl_2787 | Tchl_2792 | Fe-S assembly protein IscX. | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.879 |
Tchl_2787 | Tchl_2794 | Tchl_2787 | Tchl_2794 | Fe-S assembly protein IscX. | Cysteine desulfurase. | 0.703 |
Tchl_2787 | Tchl_2795 | Tchl_2787 | Tchl_2795 | Fe-S assembly protein IscX. | Iron-sulfur cluster regulator IscR. | 0.629 |
Tchl_2787 | hscB | Tchl_2787 | Tchl_2790 | Fe-S assembly protein IscX. | Chaperone protein HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. | 0.982 |
Tchl_2787 | iscS | Tchl_2787 | Tchl_2793 | Fe-S assembly protein IscX. | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | 0.778 |
Tchl_2788 | Tchl_2211 | Tchl_2788 | Tchl_2211 | Ferredoxin, 2Fe-2S. | Iron-sulfur cluster assembly scaffold protein, SufE2. | 0.831 |
Tchl_2788 | Tchl_2787 | Tchl_2788 | Tchl_2787 | Ferredoxin, 2Fe-2S. | Fe-S assembly protein IscX. | 0.994 |
Tchl_2788 | Tchl_2791 | Tchl_2788 | Tchl_2791 | Ferredoxin, 2Fe-2S. | Iron binding protein IscA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family. | 0.976 |
Tchl_2788 | Tchl_2792 | Tchl_2788 | Tchl_2792 | Ferredoxin, 2Fe-2S. | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.975 |
Tchl_2788 | Tchl_2794 | Tchl_2788 | Tchl_2794 | Ferredoxin, 2Fe-2S. | Cysteine desulfurase. | 0.847 |
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