STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_2982Glycerophosphoryl diester phosphodiesterase. (262 aa)    
Predicted Functional Partners:
Tchl_2983
Maebl.
       0.779
Tchl_1877
Periplasmic binding protein.
 
  
 0.709
Tchl_2984
Ferritin-like protein.
 
     0.594
Tchl_1339
Long chain fatty acid--AMP ligase.
  
 
 0.540
Tchl_2981
Membrane-bound lytic murein transglycosylase B precursor.
       0.486
Tchl_3193
Putative hydrolase.
  
  
 0.483
Tchl_2420
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.469
Tchl_1344
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
   
 0.468
Tchl_2943
Phosphate transport system permease protein PstA.
  
  
 0.453
Tchl_2990
Aminobutyraldehyde dehydrogenase.
 
   
 0.450
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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