Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tchl_3203Sensory box histidine kinase. (497 aa)    
Predicted Functional Partners:
Tchl_1643
Histidine kinase.
 
 0.989
Tchl_3204
DNA-binding response regulator, LuxR family.
 
 
 0.977
Tchl_2954
Sensory box histidine kinase/response regulator.
 
 
 0.962
Tchl_1925
Diguanylate cyclase.
 
 
 0.948
Tchl_3202
Sensory box histidine kinase.
 
 
 0.946
Tchl_1600
Histidine kinase.
  
 
 0.938
Tchl_2228
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
  
 
 0.933
Tchl_2473
Diguanylate cyclase.
  
 
 0.933
Tchl_1927
Diguanylate cyclase.
 
 
 0.904
Tchl_1671
Response regulator.
 
 
 0.902
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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