STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCN6Chloride voltage-gated channel 6; Belongs to the chloride channel (TC 2.A.49) family. (1135 aa)    
Predicted Functional Partners:
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
   
 0.894
SGSH
N-sulfoglucosamine sulfohydrolase.
   
  
 0.726
RAPGEF5
Rap guanine nucleotide exchange factor 5.
      
 0.690
CLN5
Uncharacterized protein.
      
 0.635
CLN6
CLN6 transmembrane ER protein.
      
 0.633
MFSD8
Major facilitator superfamily domain containing 8.
      
 0.583
CLN3
Battenin.
      
 0.559
SCN3B
Sodium voltage-gated channel beta subunit 3.
      
 0.534
KCNN3
Potassium calcium-activated channel subfamily N member 3.
   
 
 0.531
FAM131B
Family with sequence similarity 131 member B.
   
 
 0.513
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.