STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMBR1LLimb development membrane protein 1 like; Belongs to the LIMR family. (489 aa)    
Predicted Functional Partners:
FBXL20
F-box domain-containing protein.
   
  
 0.871
SH2D3C
SH2 domain containing 3C.
    
 
 0.789
PTPN20
Protein tyrosine phosphatase non-receptor type 20.
    
 
 0.686
YPEL3
Yippee like 3.
      
 0.681
FAM81A
Family with sequence similarity 81 member A.
      
 0.680
KCNK10
Potassium two pore domain channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.679
PDE3A
Phosphodiesterase.
   
 
 0.673
SEC24A
SEC24 homolog A, COPII coat complex component.
   
 
 0.567
SASH3
SAM and SH3 domain containing 3.
      
 0.543
TOR2A
Torsin.
      
 0.532
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.