STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUF60Poly(U) binding splicing factor 60. (654 aa)    
Predicted Functional Partners:
FUBP1
Far upstream element binding protein 1.
   
 
 0.946
CHERP
Calcium homeostasis endoplasmic reticulum protein.
   
 0.939
SMNDC1
Survival motor neuron domain containing 1.
   
 0.935
DHX15
DEAH-box helicase 15.
   
 0.927
PHF5A
PHD finger protein 5A.
   
 
 0.924
U2SURP
U2 snRNP associated SURP domain containing.
   
 0.924
RBM17
RNA binding motif protein 17.
   
 
0.924
SF3B3
Splicing factor 3b subunit 3.
    
 0.883
FUBP3
Far upstream element binding protein 3.
   
 
 0.824
KHSRP
KH-type splicing regulatory protein.
   
 
 0.823
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.