STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRPF6Pre-mRNA processing factor 6. (955 aa)    
Predicted Functional Partners:
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.999
PRPF31
Pre-mRNA processing factor 31.
   
 0.999
PRPF8
Pre-mRNA processing factor 8.
   
 0.999
PRPF3
Pre-mRNA processing factor 3.
   
 0.999
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
 0.999
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
   
 0.998
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 0.998
TXNL4A
Thioredoxin like 4A.
    
 0.998
MFAP1
Microfibril associated protein 1.
   
 0.997
ZMAT2
Zinc finger matrin-type 2.
   
 0.996
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.