Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATG12 | ATG5 | ENSFCAP00000007041 | ENSFCAP00000046882 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.999 |
ATG12 | DDX58 | ENSFCAP00000007041 | ENSFCAP00000001203 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | DExD/H-box helicase 58. | 0.953 |
ATG5 | ATG12 | ENSFCAP00000046882 | ENSFCAP00000007041 | Autophagy protein 5; Involved in autophagic vesicle formation. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | 0.999 |
ATG5 | DDX58 | ENSFCAP00000046882 | ENSFCAP00000001203 | Autophagy protein 5; Involved in autophagic vesicle formation. | DExD/H-box helicase 58. | 0.953 |
CYLD | DDX58 | ENSFCAP00000030884 | ENSFCAP00000001203 | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | DExD/H-box helicase 58. | 0.955 |
CYLD | DHX58 | ENSFCAP00000030884 | ENSFCAP00000001983 | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | DExH-box helicase 58. | 0.463 |
CYLD | ISG15 | ENSFCAP00000030884 | ENSFCAP00000036221 | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | ISG15 ubiquitin like modifier. | 0.497 |
CYLD | OASL | ENSFCAP00000030884 | ENSFCAP00000008943 | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | 2'-5'-oligoadenylate synthetase like. | 0.463 |
CYLD | RNF125 | ENSFCAP00000030884 | ENSFCAP00000054400 | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | Ring finger protein 125. | 0.506 |
CYLD | TRAF6 | ENSFCAP00000030884 | ENSFCAP00000047805 | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.992 |
DDX58 | ATG12 | ENSFCAP00000001203 | ENSFCAP00000007041 | DExD/H-box helicase 58. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | 0.953 |
DDX58 | ATG5 | ENSFCAP00000001203 | ENSFCAP00000046882 | DExD/H-box helicase 58. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.953 |
DDX58 | CYLD | ENSFCAP00000001203 | ENSFCAP00000030884 | DExD/H-box helicase 58. | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | 0.955 |
DDX58 | DHX58 | ENSFCAP00000001203 | ENSFCAP00000001983 | DExD/H-box helicase 58. | DExH-box helicase 58. | 0.982 |
DDX58 | EIF2AK2 | ENSFCAP00000001203 | ENSFCAP00000005891 | DExD/H-box helicase 58. | Eukaryotic translation initiation factor 2 alpha kinase 2. | 0.944 |
DDX58 | ISG15 | ENSFCAP00000001203 | ENSFCAP00000036221 | DExD/H-box helicase 58. | ISG15 ubiquitin like modifier. | 0.993 |
DDX58 | OASL | ENSFCAP00000001203 | ENSFCAP00000008943 | DExD/H-box helicase 58. | 2'-5'-oligoadenylate synthetase like. | 0.986 |
DDX58 | RNF125 | ENSFCAP00000001203 | ENSFCAP00000054400 | DExD/H-box helicase 58. | Ring finger protein 125. | 0.942 |
DDX58 | TRAF6 | ENSFCAP00000001203 | ENSFCAP00000047805 | DExD/H-box helicase 58. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.953 |
DDX58 | TRIM25 | ENSFCAP00000001203 | ENSFCAP00000007439 | DExD/H-box helicase 58. | Tripartite motif containing 25. | 0.989 |
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