STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP6La ribonucleoprotein domain family member 6. (492 aa)    
Predicted Functional Partners:
GMNC
Geminin coiled-coil domain containing.
      
 0.796
MAB21L3
Mab-21 like 3.
   
  
 0.789
STRAP
WD_REPEATS_REGION domain-containing protein.
    
 
 0.780
CSDE1
Cold shock domain containing E1.
      
 0.718
TTC25
Tetratricopeptide repeat domain 25.
      
 0.675
RNF6
Ring finger protein 6.
      
 0.669
PEX5L
Peroxisomal biogenesis factor 5 like.
      
 0.668
LYPLAL1
Lysophospholipase like 1.
      
 0.663
TM2D3
TM2 domain containing 3.
      
 0.660
MCEE
Methylmalonyl-CoA epimerase.
      
 0.651
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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