STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX40DEAH-box helicase 40. (779 aa)    
Predicted Functional Partners:
DDX49
DEAD-box helicase 49; Belongs to the DEAD box helicase family.
   
 0.824
UTP3
UTP3 small subunit processome component.
   
 0.785
UTP14A
Uncharacterized protein.
   
 0.785
ITSN2
Intersectin 2.
   
  0.784
SLU7
SLU7 homolog, splicing factor.
   
 0.766
NSRP1
Nuclear speckle splicing regulatory protein 1.
   
 0.763
NOL6
Nucleolar protein 6.
   
 0.762
UTP18
UTP18 small subunit processome component.
   
 0.760
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.756
NOP14
NOP14 nucleolar protein.
 
 
 0.756
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.