STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSD1Nuclear receptor binding SET domain protein 1. (2701 aa)    
Predicted Functional Partners:
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
    
 0.841
HUWE1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
   
  
 0.713
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
    
 0.688
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
 0.688
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.674
VSX1
Visual system homeobox 1.
   
  
 0.647
ZMIZ1
Zinc finger MIZ-type containing 1.
   
 0.637
ZNF385A
Zinc finger protein 385A.
   
 0.620
RAI1
Retinoic acid induced 1.
   
 
 0.606
RARB
Retinoic acid receptor beta.
   
 0.598
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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