STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX41DEAD-box helicase 41. (622 aa)    
Predicted Functional Partners:
TRIM21
Tripartite motif containing 21.
    
 0.973
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
 0.891
CGAS
Cyclic GMP-AMP synthase.
      
 0.851
CDC40
Cell division cycle 40.
    
 0.833
ALYREF
Aly/REF export factor.
   
  0.824
TBK1
TANK binding kinase 1.
    
 0.768
ENSFCAP00000031802
PWI domain-containing protein.
    
  0.750
SRRM1
Serine and arginine repetitive matrix 1.
    
  0.750
DHX36
DEAH-box helicase 36.
   
 0.747
DHX29
ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.
   
 0.740
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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